Biocomputation Group
at the University of Pennsylvania


Question or Comment
Contact: Valentina Sokolskaya
Last updated: January 10, 05

Publications from the Biocomputation Group

Belta, C., Esposito, J. M., Kim, J, and Kumar, V., Computational techniques for analysis of genetic network dynamics, Int. Journal of Robotics Research, 2004 (in press) pdf

J. Esposito and V. Kumar, An Asynchronous Integration and Event Detection Algorithm for Simulating Multi-Agent Hybrid Systems, ACM Transactions on Modeling and Computer Simulation, Vol. 14, No. 4, Oct. 2004: 363-388.pdf

Belta, C., Finin, P., Habets, L.C., Halasz, A., Imielinski, M., Kumar, V., and Rubin, H. Understanding the Bacterial Stringent Response Using Reachability Analysis of Hybrid Systems. 7th International Workshop on Hybrid Systems: Computation and Control. Lecture Notes in Computer Science 2993. R. Alur and G. J. Pappas (Eds.) 111-125, 2004. pdf

Rajeev Alur, Calin Belta, Franjo Ivancic, Vijay Kumar, Harvey Rubin, Jonathan Schug, Oleg Sokolsky, and Jonathan Webb, Visual Programming for Modeling and Simulation of Biomolecular Regulatory Networks, pdf

Calin Belta, Luc Habets, and Vijay Kumar, Control of multi-affine systems on rectangles with applications to hybrid biomolecular networks, CDC, Las Vegas, NV, Dec. 2002 ps

Rajeev Alur, Calin Belta, Vijay Kumar, Max Mintz, George J. Pappas, Harvey Rubin, Jonathan Schug, Modeling and Analyzing Biomolecular Networks, CiSE magazine, Jan/Feb 4(1), 2002 pdf

C. Belta, J. Schug, T. Dang, V. Kumar, G. J. Pappas, H. Rubin, P. V. Dunlap, Stability and reachability analysis of a hybrid model of luminescence in the marine bacterium Vibrio fischeri, from 40th IEEE CDC, Orlando, Florida, 2001, ps, pdf or Technical report, ps, pdf

R. Alur, C. Belta, F. Ivancic, V. Kumar, M. Mintz, G. Pappas, H. Rubin, J. Schug, Hybrid modelling and simulation of biomolecular networks, 4th International Workshop on Hybrid Systems: Computation and Control, Rome, Italy, March 2001, ps, pdf